Differentials

Malaria infection

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Residence in/travel from malaria-endemic region.

Inadequate or absence of malaria chemoprophylaxis.

Difficult to distinguish from CCHF infection without diagnostic testing.

INVESTIGATIONS

Giemsa-stained blood film: positive for Plasmodium species.

Rapid diagnostic tests: positive for Plasmodium species.

Ebola virus infection

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

There are no differentiating signs or symptoms.

Epidemiological features can help differentiate between the viral haemorrhagic fevers.

INVESTIGATIONS

Reverse transcription-polymerase chain reaction (RT-PCR): positive for Ebola virus.

It is recommended that appropriate confirmatory tests for Ebola virus infection are performed before, or in tandem with, differentiating tests if Ebola virus infection is suspected.

Lassa fever

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

There are no differentiating signs or symptoms.

Epidemiological features can help differentiate between the viral haemorrhagic fevers.

Exposure to rats in endemic areas.

INVESTIGATIONS

RT-PCR: positive for Lassa virus.

Typhoid fever

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Exposure to contaminated water/food, direct faecal-oral contact, age <5 or >50 years, malnutrition, poor hygiene and cramped conditions, chronic illness, and travel to endemic areas.

INVESTIGATIONS

Blood or stool culture: positive for Salmonella enterica.

Leptospirosis

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

There are no differentiating signs or symptoms; however, a history of exposure may be helpful.

Exposure to contaminated water or soil contaminated by infected rodents.[75]

More common in tropical climates.

INVESTIGATIONS

PCR: positive.

Serology: positive.

It is recommended that appropriate confirmatory tests for CCHF are performed before, or in tandem with, differentiating tests if CCHF is suspected.

Influenza infection

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Respiratory signs or symptoms (e.g., cough, nasal congestion) are more common.

INVESTIGATIONS

Viral culture or PCR: detection of seasonal influenza virus or viral RNA.

FBC: normal.

Sepsis

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Bacterial sepsis with an unclear origin is a common presentation in developing countries. Often turns out to be deep abdominal infection, upper urinary tract infection, endocarditis, or discitis.

Diarrhoea is often absent.

INVESTIGATIONS

Blood cultures: positive.

Rickettsial diseases

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Includes murine typhus, African tick-bite fever, and epidemic typhus.[76]

Eschar is typical.

Lymphadenopathy may be present.

Discrete rash.

INVESTIGATIONS

Serology: positive for Rickettsia species.

Eschar PCR: positive for Rickettsia species.

West Nile virus infection

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Residence in/travel from West Nile virus-endemic region.

Visual disturbances common.

Rarely causes neuroinvasive disease (e.g., encephalitis, meningitis, flaccid paralysis syndrome).

Difficult to distinguish from CCHF virus infection without diagnostic testing.

INVESTIGATIONS

West Nile virus-specific IgM in serum or CSF: positive.

Rift Valley fever

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Residence in/travel from Rift Valley fever virus-endemic region.

Contact with mosquitoes or infected animals.

INVESTIGATIONS

RT-PCR: positive for Rift Valley fever virus.

Marburg virus infection

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

There are no differentiating signs or symptoms.

Epidemiological features can help differentiate between the viral haemorrhagic fevers.

Exposure to bats, caves, or mining.

INVESTIGATIONS

RT-PCR: positive for Marburg virus.

Omsk haemorrhagic fever/Kyasanur Forest disease

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

There are no differentiating signs or symptoms in the initial phase.

CNS involvement may occur in the second phase.[77]

Epidemiological features can help differentiate between the viral haemorrhagic fevers.

INVESTIGATIONS

Serum or CSF serology: positive for relevant IgM/IgG antibodies.

Yellow fever

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Residence in/travel from yellow fever endemic region.

Contact with mosquitoes or infected monkeys.

Jaundice more common in early disease.

Relative bradycardia.

INVESTIGATIONS

Serology (IgM ELISA or haemagglutination inhibition): positive for yellow fever virus RNA, increasing IgG titres.

Hantavirus

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Residence in/travel from hantavirus-endemic regions.

Residence in/travel to densely forested areas with large rodent populations.

Exposure to rodent faeces, urine, or carcasses, or rodent bite.

Pulmonary or renal involvement.

INVESTIGATIONS

RT-PCR detection of hantavirus RNA.

Onset of severe pulmonary distress.

Meningococcal disease

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Rash characteristically petechial and begins earlier than in rickettsial infections, starting centrally and spreading peripherally.

Septic shock, DIC, and digital necrosis more likely.

INVESTIGATIONS

Blood cultures (and sometimes CSF cultures): positive for Neisseria meningitidis.

Lyme disease

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

History of tick bite.

More chronic course and gradual onset.

Erythema chronicum migrans.

Lyme arthritis.

Chronic radicular paraesthesias.

INVESTIGATIONS

Positive serum antibody titre for Borrelia burgdorferi: total Lyme titre or positive IgG and IgM.

Western blot (IgM/IgG): to confirm positive titres.[78]

Brucellosis

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Exposure to unpasteurised milk products.

INVESTIGATIONS

Blood cultures: positive growth of Brucella species.

Serological tests (e.g., Wright agglutination or ELISA)

FBC: pancytopenia.

Q fever (Coxiella burnetii)

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Exposure to infected animals, occupational exposure, travel to or residence in endemic areas.

High fever (39°C to 40°C [102.2ºF to 104ºF]).

May have signs of atypical pneumonia.

INVESTIGATIONS

Immunofluorescence assay (IFA) of infected tissue: positive.

Staphylococcal or gram-negative sepsis

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Bacterial sepsis with an unclear origin is a common presentation in developing countries. Often turns out to be deep abdominal infection, upper urinary tract infection, endocarditis, or discitis.

Diarrhoea is often absent.

INVESTIGATIONS

Blood cultures: positive.

Toxic shock syndrome (TSS)

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

An acute febrile illness that is associated with vomiting, diarrhoea, myalgia, strawberry tongue, and erythematous rash with subsequent desquamation.

Many develop acute respiratory distress, hypotension, and shock.

The disease is caused by staphylococcal or group A streptococcal infections.

INVESTIGATIONS

Isolation of staphylococcus or group A streptococcus serotypes that produce TSS-1 toxin.

Psittacosis

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Exposure to infected birds and mammals.

Upper and lower respiratory tract signs or symptoms more common.

INVESTIGATIONS

Microimmunofluorescence (MIF) antibody: paired sera positive for psittacosis antibodies.

Cultures of sputum, pleural fluid, conjunctival fluid, or clotted blood: positive for Chlamydia psittaci.

Septicaemic plague

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Exposure to fleas, residency in or travel to a plague-endemic area, and contact with infected animals.

INVESTIGATIONS

Positive culture for Yersinia pestis.

Rubella

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Typically a mild fever and generalised maculopapular rash improving in about 3 days. May also have non-tender lymphadenopathy of post-auricular, posterior cervical, and occipital lymph node groups; conjunctivitis; and arthralgias or arthritis.

INVESTIGATIONS

Rubella-specific IgM antibody or other specific test for rubella.

Measles infection

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Erythematous or brownish morbilliform rash spreading from the head and neck downwards and persisting for 3 to 7 days.

Coryza, cough, and conjunctivitis are usual.

A pathognomonic enanthem (Koplik's spots) occurs early in the disease.

INVESTIGATIONS

Positive serum measles anti-IgM antibody is the preferred test.

Significant rise in serum measles anti-IgG antibody in paired acute and convalescent specimens.

Isolation of measles virus from throat, nasopharynx, blood, or urine (usually processed by public health and reference laboratories only).

Thrombotic thrombocytopenic purpura

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Thrombocytopenia and a purpuric rash.

INVESTIGATIONS

Peripheral smears show schistocytes.

HELLP syndrome (pregnant women)

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

May be mistaken for CCHF in a pregnant patient.

Brisk tendon reflexes are commonly found, as is RUQ abdominal tenderness.

Fever is not usual.

INVESTIGATIONS

Schistocytes, burr cells, and polychromasia on a peripheral blood smear are diagnostic.

Uric acid levels: typically elevated.

Haemolytic uraemic syndrome

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

More commonly seen in children, especially those aged <5 years.

Patients demonstrate more bloody diarrhoea and renal failure.

Fever may be absent.

INVESTIGATIONS

Associated with Escherichia coli O157:H7 infection, which is detected in the stool.

Coronavirus disease 2019 (COVID-19)

SIGNS / SYMPTOMS
INVESTIGATIONS
SIGNS / SYMPTOMS

Residence in/travel to a country/area or territory with local transmission, or close contact with a confirmed or probable case of COVID-19, in the 14 days prior to symptom onset.

INVESTIGATIONS

Real-time reverse transcription polymerase chain reaction (RT-PCR): positive for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA.

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